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Table 2 Performance assessment. VS and CLASS stand for variable selection method and classifier, respectively.

From: Machine learning techniques to identify putative genes involved in nitrogen catabolite repression in the yeast Saccharomyces cerevisiae

     

Negative control

VS

CLASS

BER

AUC

AUCext

BER

AUC

AUCext

Filter

NB

0.31

0.93

0.95

0.49 ± 0.022

0.50 ± 0.072

0.63 ± 0.023

 

KNN

0.18

0.90

0.91

0.51 ± 0.021

0.51 ± 0.077

0.34 ± 0.088

 

SVM

0.13*

0.93

0.98

0.48 ± 0.060

0.50 ± 0.097

0.67 ± 0.026

 

NB

0.24

0.95

0.91

0.49 ± 0.054

0.50 ± 0.130

0.48 ± 0.016

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KNN

0.20

0.97

0.66

0.48 ± 0.045

0.52 ± 0.100

0.41 ± 0.073

 

SVM

0.13*

0.95

0.88

0.47 ± 0.066

0.58 ± 0.130

0.58 ± 0.042

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BMC Proceedings

ISSN: 1753-6561

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