Table 2 Correlation between S3 PCs and other SNP subset PCs.
PCA removing MHC and inversion on chromosome 8 (S3)b | ||||||||
|---|---|---|---|---|---|---|---|---|
Subset | PC3 | PC4 | PC5 | PC6 | PC7 | PC8 | PC9 | PC10 |
S1 | PC3, PC4 (0.32,0.66) | PC5, PC6 (0.55, 0.81) | PC5, PC6 (0.46, 0.27) | PC7 (0.92) | PC8, PC9, PC10 (0.35, 0.25, 0.37) | PC9 (0.20) | ---- | ---- |
S2 | PC3, PC4 (0.29, 0.72) | PC5 (0.98) | PC6 (0.98) | PC7 (0.98) | PC8 (0.99) | PC9 (0.98) | PC10 (0.96) | ---- |
S4 | PC3 (0.98) | PC4 (0.98) | ----c | PC5 (0.92) | PC6 (0.85) | PC7, PC8 (0.61, 0.18) | PC7, PC8 (0.16, 0.58) | PC9 (0.66) |
S5 | PC3 (0.96) | PC4 (0.90) | ---- | ---- | ---- | ---- | ---- | ---- |
S6 | PC3 (0.92) | PC4 (0.83) | ---- | ---- | ---- | ---- | ---- | ---- |