Table 2 Mean number of times SNPs in simulating model were selected over 200 replicates
From: LASSO model selection with post-processing for a genome-wide association study data set
SNP | Lasso with λmin | + AIC | + BIC | Lasso with λ1se | + AIC | + BIC |
|---|---|---|---|---|---|---|
C1S6533 | 0.445 | 0.440 | 0.365 | 0.040 | 0.040 | 0.040 |
C13S431 | 0.775 | 0.665 | 0.555 | 0.185 | 0.185 | 0.180 |
C13S522 | 0.985 | 0.970 | 0.880 | 0.850 | 0.850 | 0.850 |
C13S523 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 |
C14S1734 | 0.085 | 0.065 | 0.035 | 0.000 | 0.000 | 0.000 |
C4S1878 | 0.375 | 0.265 | 0.200 | 0.045 | 0.045 | 0.045 |
C4S1884 | 0.425 | 0.385 | 0.285 | 0.055 | 0.055 | 0.055 |
Total correct | 4.09 | 3.79 | 3.32 | 2.175 | 2.175 | 2.170 |
Total selected | 28.05 | 21.18 | 14.30 | 3.29 | 3.22 | 3.10 |