Table 3 The 10 most significant features selected for the disease model and the three quantitative traits when rare variants are collapsed using the proportion collapsing method
Feature | Q1 | Q2 | Q4 | Disease |
|---|---|---|---|---|
1 | Age (200) | C6S5380 (108) | Sex (200) | Age (200) |
2 | Smoke (200) | C6S5441 (51) | Age (200) | Smoke (180) |
3 | FLT1 (n) (200) | PDGFD (n) (50) | Smoke (200) | C13S523 (39) |
4 | C13S523 (200) | LPL (n) (38) | C1ORF122 (s) (8) | FLT1 (n) (25) |
5 | KDR (n) (175) | VLDLR (n) (32) | C3S4667 (8) | PTK7 (s) (16) |
6 | C4S1878 (76) | BCHE (n) (31) | FLJ16793 (s) (8) | ADCY5 (s) (12) |
7 | ARNT (n) (72) | SIRT1 (n) (28) | RY1 (s) (8) | HOXD11 (s) (12) |
8 | MAP2K7 (s) (62) | TXNL1 (n) (24) | ACOX3 (s) (7) | TFDP1 (s) (12) |
9 | NT5C2 (s) (50) | RARB (n) (24) | OR13A1 (s) (7) | OR8D4 (s) (11) |
10 | FOXO3 (s) (35) | C9S3419 (22) | C14S697 (7) | CCNT1 (s) (11) |