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Table 1 SNPs with high marginal posterior probabilities

From: Identification of genes and variants associated with quantitative traits using Bayesian factor screening

Appearances in top 20 SNPs among 10 replicates

SNPs (genes), m=10

9

C13S523 (FLT1)

8

C13S522 (FLT1)

5

C13S431 (FLT1)

4

C4S1884 (KDR)

2

C4S1878 (KDR), C6S2981 (VEGFA), 8 SNPs not associated with Q1

1

C13S524 (FLT1), C1S6533 (ARNT), C4S1890 (KDR), 151 SNPs not associated with Q1

  1. The SNP variants that have posterior probabilities in the top 20, including both Q1-associated SNPs and false positives, are listed. The symbols of Q1-associated variants are given and those not associated with Q1 are omitted. The first column shows the frequency of a variant in the top 20 among 10 replicates.
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BMC Proceedings

ISSN: 1753-6561

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