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Table 2 Genotype counts for selected genes

From: Search for compound heterozygous effects in exome sequence of unrelated subjects

Gene

Method

Group

A/A

B/A

B/B

FLT1

Beagle

Case

142

63

4

  

Control

412

74

2

 

fastPHASE

Case

142

64

3

  

Control

412

76

0

VNN1

Beagle

Case

136

58

15

  

Control

348

123

17

 

fastPHASE

Case

136

59

14

  

Control

348

123

17

  1. A/A indicates that no nonsynonymous variants are present, B/A indicates that nonsynonymous variants were observed on only one haplotype, and B/B indicates that nonsynonymous variants were observed on both haplotypes. Counts are based on two phasing methods, Beagle and fastPHASE.
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BMC Proceedings

ISSN: 1753-6561

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