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Table 1 Ranking of empirical estimations of marginal posterior probability of significant effects under two prior assumptions

From: A Bayesian genome-wide linkage analysis of quantitative traits for rheumatoid arthritis via perfect sampling

(w1, w2) = (0.01, 0.01)

(w1, w11, w10, w00) = (0.01, 0.01, 0.01, 0.005)

Ranking

Chromosome

Relative frequencya

Ranking

Chromosome

Relative frequency

1

Chr 6

0.35

1

Chr 6

0.37

2

Chr 5

0.28

2

Chr 4

0.35

3

Chr 4

0.21

3

Chr 5

0.28

4

Chr19

0.17

4

Chr19

0.11

5

Chr 6 × Chr 19b

0.15

5

Chr 2

0.08

6

Chr 2

0.09

6

Chr 6 × Chr 16

0.05

7

Chr 6 × Chr 16

0.05

7

Chr 6 × Chr 21

0.04

8

Chr 6 × Chr 21

0.03

8

Chr 6 × Chr 19

0.02

 

Others

<0.01

 

Others

<0.005

  1. aRelative frequency corresponds to the frequency appeared in the samples. Effects that appeared more than once are displayed.
  2. b"A × B" stands for an epistasis between chromosomes A and B.
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BMC Proceedings

ISSN: 1753-6561

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