Skip to main content

Table 3 Association analysis of NFKB1 using HapMap dataa

From: Analysis of variation in NF-κB genes and expression levels of NF-κB-regulated molecules

Phenotype SNP p-Value Haplotype p-Value
BCL2A1 rs17032779 0.035 rs17032779-rs230519-rs93059 0.040
CD44 rs230506 0.034 rs230506-rs230505-rs230504 0.009
  rs3774934 0.034 rs3774933-rs3774934-rs4647972 0.037
CD80 rs4648091 0.025 rs4648090-rs4648091-rs4648095 0.049
  rs4648134 0.025 rs4648133-rs4648134-rs4648135 0.017
FAS rs4648134 0.032 --- ---
ICAM1 rs4648134 0.032 rs4648133-rs4648134-rs4648135 0.050
IRF1 rs1598859 0.032 rs1610152-rs1598859-rs3774956 0.040
  rs3774959 0.032 rs3821958-rs1020759-rs3774959 0.040
VCAM1 rs7679591 0.011 rs230528-rs7679591-rs230526 0.040
  rs17032779 0.014 rs230521-rs230520-rs17032779 0.047
  rs4648018 0.014 rs4648016-rs4648018-rs230500 0.046
  rs4648069 0.014 rs4648055-rs4648068-rs4608069 0.049
  rs4648091 0.014 rs4648090-rs4648091-rs4648095 0.010
  rs4648134 0.014 rs4648133-rs4648134-rs4648135 0.050
  rs10489114 0.014 rs3774959-rs10489114-rs7377680 0.034
  rs4648015 0.014 rs230496-rs4648015-rs230498 0.041
  rs4648016 0.014 rs230498-rs4648016-rs4648018 0.046
  rs4648043 0.014 rs3774956-rs4648043-rs3821958 0.037
  1. aFamily-based association tests suggested SNP rs4648136 and haplotype rs4648134-rs4648135-rs4648136 associated with CD80, FAS and ICAM1 phenotypes.