Analysis of variation in NF-κB genes and expression levels of NF-κB-regulated molecules

BMC Proceedings

Table 4 Association analysis of REL using HapMap data^a

Phenotype	SNP	p-Value	Haplotype	p-Value
CD40	rs13422089	0.028	rs6545835-rs10208155-rs13422089	0.070
IL15	rs842648	0.038	rs13422089-rs842648-rs13022703	0.050
IRF1	rs842644	0.010	rs842644-rs6545836-rs10193964	0.050
JUNB	rs6545835	0.047	rs6545835-rs10208155-rs13422089	0.050
	rs10208155	0.047	---	---
	rs13422089	0.008	rs13422089-rs842648-rs13022703	0.048
	rs10185028	0.047	rs10185028-rs842647-rs842644	0.027
SLC2A5	rs6545835	0.019	rs6545835-rs10208155-rs13422089	0.020
	rs10208155	0.019	rs6545835-rs10208155-rs13422089	0.020
	rs13422089	0.035	rs6545835-rs10208155-rs13422089	0.020
	rs10185028	0.019	rs10185028-rs842647-rs842644	0.004
	rs842644	0.047	rs10185028-rs842647-rs842644	0.004
	rs6545836	0.019	rs842647-rs842644-rs6545836	0.004
	rs10193964	0.019	rs842644-rs6545836-rs10193964	0.002
VCAM1	rs842644	0.010	rs842644-rs6545836-rs10193964	0.048

^aFamily-based association tests did not suggest associations with the above phenotypes.

ISSN: 1753-6561