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Table 1 Results for the first 10 regions in the first replicates

From: A two-step multiple-marker strategy for genome-wide association studies

  Step 1 Step 2  
Region Chr IDs of the 2 extreme markers bounding a region Local Scoresa FBAT_LC p-valueb Bonferroni corrected p-value Trait loci in the region
1 6 128 162 8235.4874 0.000000 0.000000 DR, C, D
2 11 387 396 202.3407 0.000000 0.000000 F
3 18 269 269 44.5575 0.000000 0.000000 E
4 18 10 11 28.2714 0.042545 0.425450  
5 10 355 357 16.8203 0.476407 1.000000  
6 4 347 348 11.7416 0.440749 1.000000  
7 6 355 355 11.6840 0.002913 0.029130  
8 3 58 58 11.5742 0.137617 1.000000  
9 8 392 392 11.5131 0.387798 1.000000  
10 7 94 95 11.4852 0.706698 1.000000  
  1. aLocal Scores obtained from the first replicate of case-control data.
  2. bp-Values obtained from FBAT-LC applied to regions selected in Step 1 in the first replicate of family data.