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Table 2 Expression phenotypes with significant linkage signals

From: Statistical corrections of linkage data suggest predominantly cis regulations of gene expression

Gene

Location

Z

cis/trans

ZP3

7q11.23

9.62

cis

LRAP

5q15

8.92

cis

LOC388796

20q11.23

8.79

cis

HLA-DQB1

6p21.3

8.18

cis

RPL31

2q11.2

7.92

cis

HSD17B12

11p11.2

7.82

cis

CHI3L2

1p13.3

7.78

cis

EIF5A

17p13

7.61

cis

CSTB

21q22.3

7.59

cis

TM7SF3

12q11

7.56

cis

CGI-96

22q13.2

7.50

cis

HLA-DPB1

6p21.3

7.47

cis

DDX17

22q13.1

7.42

cis

EGR2

10q21.1

7.15

trans

DSCR2

21q22.3

7.03

trans

PEX6

6p21.1

6.98

cis

TGB1BP1

2p25.2

6.92

cis

PSPH

7p15.2

6.90

cis

PARP4

13q11

6.72

cis

AP3S2

15q26.1

6.54

cis

TGIF

18p11.3

6.52

trans

CPNE1

20q11.22

6.51

cis

  1. Shown are the 22 linkages detected by our corrected method (FDR = 10%). The first 19 of these were also detected using the permutation-based procedure (FDR = 10%).