| | | |
Affymetrix
|
dChip
|
---|
Genea
|
Locationb
|
Probe
|
Morley et al. p-value
|
LOD
|
p-value
|
Position (cM)
|
LOD
|
p-value
|
Position (cM)
|
---|
CHI3L2
|
1p13.3
|
213060.s.at
|
10-10
|
11.6
|
<10-12
|
111.8
|
12.7
|
<10-13
|
111.9
|
ZP3
|
7q11.23
|
210910.at
|
<10-9
|
13
|
<10-14
|
75.6
|
9.9
|
<10-11
|
75.1
|
PSPH
|
7p15.2
|
205048.s.at
|
<10-10
|
6.1
|
<10-7
|
64.3
|
7.7
|
<10-8
|
64.3
|
UGT2B17
|
4q13
|
207245.at
|
---c
|
8.3
|
<10-9
|
62.3
|
9.6
|
<10-10
|
62.3
|
LRAP
|
5q15
|
219759.at
|
---
|
8.1
|
<10-9
|
99
|
7.6
|
<10-8
|
90.2
|
HLA-DQB1
|
6p21.3
|
209480.at
|
---
|
9
|
<10-10
|
36
|
12
|
<10-13
|
32.9
|
HLA-DPB1
|
6p21.3
|
201137.s.at
|
---
|
8.8
|
<10-10
|
31.6
|
8.7
|
<10-9
|
31.6
|
DDX17
|
22q13
|
208151.x.at
|
<10-9
|
5.9
|
<10-7
|
43.5
|
1.2
|
<10-2
|
43.2
|
IL16
|
15q26.3
|
209827.at
|
<10-9
|
---c
|
---
|
---
|
---
|
---
|
---
|
ALG6
|
1p31
|
219649.at
|
<10-9
|
---
|
---
|
---
|
---
|
---
|
---
|
ICAP-1A
|
2p25
|
-
|
<10-11
|
---
|
---
|
---
|
---
|
---
|
---
|
HOMER1
|
5q14.2
|
213793.at
|
<10-10
|
---
|
---
|
---
|
---
|
---
|
---
|
HSD17B12
|
11p11.2
|
217974.at
|
<10-10
|
---
|
---
|
---
|
---
|
---
|
---
|
TM7SF3
|
12q11-12
|
217869.at
|
<10-11
|
---
|
---
|
---
|
---
|
---
|
---
|
TNFRSF11A
|
18q22.1
|
207037.at
|
<10-9
|
---
|
---
|
---
|
---
|
---
|
---
|
CBR1
|
21q22.13
|
209213.at
|
<10-10
|
---
|
---
|
---
|
---
|
---
|
---
|
DSCR2
|
21q22.3
|
203405.at
|
<10-10
|
---
|
---
|
---
|
---
|
---
|
---
|
- a The first group of genes shows agreement between Morley et al. [2] and our findings. The second group represents our significant findings at the level of significance 10-8 or less but not in Morley's. The third group represents significance in Morley's findings and not ours. The fourth group shows findings in Morley that we did not examine (H2 < 0.6). The LOD represents the maximum LOD scores in the chromosome where the genes are located with its respective p-values and positions in cM.
- b Location was determined by the file HG-Focus_annot.csv.
- c --- indicates either the probes are not published by Morley et al. [2] or are not analyzed by us.