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Table 1 Number of expressions with at least one significant eQTL

From: Controlling for false positive findings of trans-hubs in expression quantitative trait loci mapping

  Genome-wide significance level (point-wise significance level)
  0.05 (4.7 × 10-6) 0.01 (3.2 × 10-7) 0.001 (6.7 × 10-9)
Threshold by Gaussian approximation 4.43 4.98 5.68
Number by chance (95% CI) 177.7 (162.2, 193.2) 35.6 (28.5, 42.6) 3.6 (1.3, 5.8)
Original data
   Threshold by permutation 4.36 4.95 5.68
   Number by permutation (95% CI) 176.0 (139.0, 224.5) 36.0 (24.0, 56.0) 4.0 (0, 9.0)
   Observed number 235 66 24
   Sibship only 173 40 13
Residual data (9p13.3)
   Threshold by permutation 4.45 5.06 5.81
   Number by permutation (95% CI) 180.0 (154.0, 207.0) 36.0 (25.0, 48.0) 4.0 (0, 8.0)
   Observed number 225 87 26
Residual data (14q32)
   Threshold by permutation 4.46 5.07 5.85
   Number by permutation (95% CI) 178.0 (151.5, 205.0) 36.0 (24.0, 47.0) 3 (0, 8.0)
   Observed number 212 70 23