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Table 3 Summary of cis/trans real-linkage results (N, number of QTLs)

From: Effects on linkage analyses of different Affymetrix expression measures as quantitative trait phenotypes

  

LOD ≥ 3

LOD ≥ 5

Set

Mean LOD (max)

cis N

trans N (Traits)

cis N

trans N (Traits)

REFQT

5.54 (20.01)

15

25 (11)

11

2

MAS5QP

4.11 (20.49)

15

184 (18)

10

33 (5)

RMAQP

5.85 (23.09)

10

26 (16)

11

2

GCRMAQP

5.44 (23.09)

11

28 (13)

10

2

DCHIPMMQP

4.77 (25.17)

11

42 (12)

9

2

DCHIPPMQP

4.40 (25.36)

10

62 (12)

8

4 (2)