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Table 2 Maximum TLOD and HLOD scores

From: Analysis of high-density single-nucleotide polymorphism data: three novel methods that control for linkage disequilibrium between markers in a linkage analysis

  Chromosome 6 Chromosome 21
  MCLINK Merlin MCLINK Merlin
  Maximum TLOD position Maximum HLOD position Maximum TLOD position Maximum HLOD position
Complete SNP set 16.95 28.96 16.40 28.96 11.75 37.44 11.31 37.46
PCA-Haplotype 16.07 28.96 15.61 28.96 1.09 37.38 1.30 37.38
PCA-Genotype 11.52 28.96 11.35 28.96 0.98 36.01 1.25 36.01
SNPLINK 14.65 28.96 14.18 33.0 0.83 37.38 0.98 36.01
  Maximum TLOD position Maximum TLOD position
McLink-LD 9.07 38.61 1.17 38.16
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