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Table 1 Results: Power

From: Joint linkage and association analysis for identification of potentially causal polymorphisms in GAW15 data

  Power (%)b
SNP/marker/Haplotype/SNP seta Li-cpg Lamp Sun-cpg
152 100 100 100
153 93 93 90
154 100 100 100
155 100 100 100
162 100 100 100
153, 162 -- -- 100
153, 154 -- -- 73
153, 154, 162 -- -- 51
d3437–d3439 9 -- 8
d3437–153 9 -- 8
d3437–d3439, d3931 -- -- 4
d3437–d3439, d3933 -- -- 4
DRB1 99 100,100,100 32
  1. a"SNP set" is a set of SNPs that need not be fully linked. The SNPs in the set are separated by commas. A "haplotype" is composed of two "fully linked" SNPs. The SNPs in a haplotype are shown separated by a dash.
  2. bPower to reject the null hypothesis that association with the SNP/marker/SNP set/haplotype can explain all the linkage at a given location.