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Table 1 Most associated subsets of one, two and three SNPs

From: Modeling the effect of PTPN22in rheumatoid arthritis

Subset χ2 df χ2 value Corrected p-value Compared subsets NCST df NCST value NCST p-value
9 2 47.6 9.5×10-8 - - - -
4_9 4 54.0 11.0×10-8 4_9 vs. 9 2 6.4 0.041
9_10 7 61.3 17.2×10-8 9_10 vs. 9 5 13.7 0.017
9_11 5 57.3 9.2×10-8 9_11 vs. 9 3 9.7 0.021
9_10_11 12 73.0 17.8×10-8 9_10_11 vs. 9_10 5 11.7 0.038