Table 3 Power (in percentage) for testing linkage adjusted for association (T2)
From: Joint modeling of linkage and association using affected sib-pair data
LD group (number of SNPs) | |||||
|---|---|---|---|---|---|
Significance level (%) | 0 <r2 <= 0.01 (n = 1751) | 0.01 <r2 <= 0.1 (n = 304) | 0.1 <r2 <= 0.3 (n = 29) | 0.3 <r2 <= 0.92 (n = 18) | |
Millstein-c | 5 | 97.3 | 97.9 | 97.1 | 75.6 |
1 | 95.4 | 96.5 | 93.1 | 62.7 | |
0.1 | 93 | 94.8 | 85.9 | 50.8 | |
LAMP-LD | 5 | 100 | 100 | 99.9 | 99.3 |
1 | 100 | 100 | 99.8 | 98.8 | |
0.1 | 100 | 100 | 99.8 | 97.2 | |
HST-LD | 5 | 100 | 100 | 100 | 96.6 |
1 | 100 | 100 | 100 | 96.6 | |
0.1 | 100 | 100 | 100 | 93.2 | |