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Table 1 Effect estimates of the selected variables

From: Picking single-nucleotide polymorphisms in forests

  logRega  
Variable Coef SE nominal p adjusted p Simulated effects
DR allele from mother 1.476 0.114 <10-15 <10-13  
DR allele from father 1.480 0.115 <10-15 <10-13  
Chr 11 bp110, 204, 257 0.822 0.123 2.40 × 10-11 7.20 × 10-10 Locus F
Lifetime smoking 0.976 0.168 7.06 × 10-9 2.05 × 10-7 Smoking
Gender 0.804 0.169 2.14 × 10-6 5.99 × 10-5 Gender
Chr 6 bp 32, 521, 277 -0.861 0.201 1.87 × 10-5 0.0005 DR/Locus C
Chr 18 bp 66, 048, 927 0.333 0.133 0.0121 0.3146 Locus E
Chr 6 bp 36, 582, 440 0.634 0.255 0.0131 0.3275 Locus D
Chr 6 bp 28, 758, 332 0.248 0.125 0.0477 1.0000  
Chr 1 bp 26, 043, 914 0.185 0.143 0.1942 1.0000  
Chr 2 bp 34, 451, 973 0.154 0.126 0.2228 1.0000  
Chr 6 bp 30, 266, 243 -0.184 0.165 0.2647 1.0000  
Chr 7 bp 97, 632, 608 0.116 0.125 0.3522 1.0000  
Chr 6 bp 26, 075, 047 -0.126 0.138 0.3613 1.0000  
Chr 18 bp 10, 152, 707 0.098 0.115 0.3907 1.0000  
Chr 8 bp 127, 252, 736 -0.101 0.121 0.4050 1.0000  
Chr 13 bp 45, 600, 085 -0.212 0.258 0.4094 1.0000  
Chr 13 bp 31, 890, 164 0.090 0.116 0.4356 1.0000  
Chr 11 bp 22, 794, 066 0.118 0.155 0.4475 1.0000  
Chr 5 bp 57, 110, 585 -0.251 0.337 0.4559 1.0000  
Chr 6 bp 32, 772, 203 0.094 0.133 0.4769 1.0000  
Chr 4 bp 15, 714, 556 0.066 0.112 0.5547 1.0000  
Chr 6 bp 133, 756, 692 0.072 0.133 0.5885 1.0000  
Chr 14 bp 37, 328, 424 0.073 0.142 0.6051 1.0000  
Chr 1 bp 48, 687, 156 -0.192 0.378 0.6115 1.0000  
Chr 15 bp 77, 852, 281 0.097 0.195 0.6170 1.0000  
Chr 10 bp 10, 764, 908 0.050 0.133 0.7034 1.0000  
Chr 15 bp 66, 671, 014 0.049 0.222 0.8235 1.0000  
Chr 2 bp 17, 889, 207 0.059 0.269 0.8261 1.0000  
Chr 6 bp 155, 580, 230 -0.020 0.131 0.8757 1.0000  
Chr 7 bp 8, 524, 374 -0.009 0.116 0.9332 1.0000  
Chr 2 bp 157, 502, 490 0.018 0.570 0.9744 1.0000  
Intercept -11.464 1.594    
  1. alogReg, logistic regression; Coef, estimated regression coefficient; SE, standard error, nominal p, two-sided nominal p-value; adjusted p, two-sided p-value adjusted according to the Bonferroni-Holm procedure; chr, chromosome; bp, base pair.