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Table 2 Main effects model on all chromosomes

From: Detecting disease-causing genes by LASSO-Patternsearch algorithm

Variable Level Coefficient SD p-Value
Smoking - 1.0434 0.1214 10-18
Sex - 1.0819 0.1251 10-18
SNP6_154 1 -1.6228 0.1395 10-31
SNP6_162 1 2.2717 0.2885 10-15
HLA DR type, father 2 2.3848 0.1405 10-64
HLA DR type, mother 2 2.3443 0.1388 10-64
SNP6_154 2 -3.0081 0.5492 10-8
SNP11_389 2 0.9521 0.1264 10-14
  1. aFor SNPs, level is the number of variant alleles. For DR type, level = 1 means DR1 and level = 2 means DR4.