Table 1 Results of MDR and GENN analysis in data sets 1 and 2
From: Exploring epistasis in candidate genes for rheumatoid arthritis
| Â | Â | Data set 1 | Data set 2 | ||
|---|---|---|---|---|---|
| Â | Â | Dupes | No dupes | Dupes | No dupes |
MDR BA | Best model | rs2476601 | rs2476601 | rs2476601 | rs2476601 |
| Â | BPA | 57.63 | 66.18 | 58.55 | 66.28 |
| Â | CVC (5) | 5 | 5 | 5 | 5 |
| Â | p-value | 0.01 | 0.03 | 0.00 | 0.00 |
MDR model-adjusted BA | Best model | rs2476601 | rs2476601 | rs2476601 | rs2476601 |
| Â | BPA | 57.99 | 66.18 | 58.55 | 66.28 |
| Â | CVC (5) | 5 | 5 | 5 | 5 |
| Â | p-value | 0.01 | 0.03 | 0.00 | 0.00 |
GENN | Best model | rs2476601 | rs2476601 | rs2476601 | rs2476601 |
| Â | BPA | 59.98 | 58.15 | 55.93 | 56.07 |
| Â | CVC (10) | 10 | 8 | 10 | 10 |
| Â | p-value | <0.05 | <0.03 | <0.05 | <0.05 |
MDR NMI | Best model | rs2476601 | rs2476601 | rs2476601 | rs2476601 |
| Â | NMI | 0.03211 | 0.03528 | 0.03291 | 0.02579 |
| Â | CVC (5) | 5 | 5 | 5 | 5 |
| Â | p-value | 0.004 | 0.017 | 0.0000 | 0.0000 |