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Table 1 19 gene expression phenotypes with genome-wide significant linkage evidence after correcting for multiple tests

From: A genome-wide linkage study of GAW15 gene expression data

   Merlin VC LOD Linkage peak position   SIBPAL linkage
Genea Location log2-transformed not log2-transformed Chr position (cM) h 2 log2-transformed not log2-transformed
LOC388796 20q11 14.65 13.92 20 59.3 0.66 2.9 × 10-13 7.4 × 10-13
ZP3 7q11 13.91 13.34 7 84.5 0.87 1.1 × 10-16 4.4 × 10-14
CHI3L2 1p13 13.06 12.72 1 119.2 0.75 <10-16 <10-16
LRAP 5q15 11.38 8.51 5 105 0.58 <10-16 4.4 × 10-16
DDX17 22q13 11.36 10.3 22 49.8 0.59 3.0 × 10-11 4.4 × 10-12
PSPH 7p15 10.99 8.74 7 78.7 0.64 5.0 × 10-9 5.2 × 10-5
UGT2B17 4q13 9.62 3.43 4 74.8 0.62 2.7 × 10-5 0.03
HLA-DPB1 6p21 8.87 8.8 6 49.7 0.7 5.0 × 10-6 3.2 × 10-5
ITGB1BP1 2p25 8.25 8.31 2 25.5 0.66 4.4 × 10-11 2.1 × 10-10
CSTB 21q22 7.39 7.54 21 85.4 0.49 7.4 × 10-10 7.0 × 10-9
PPAT 4q12 6.72 6.65 4 66.7 0.36 2.8 × 10-8 4.8 × 10-8
IRF5 7q32 6.08 6.32 7 124.2 0.51 3.1 × 10-15 1.8 × 10-14
PEX6 6p21 5.86 5.67 6 56.4 0.63 2.1 × 10-5 9.2 × 10-7
RPL31 2q11 5.77 5.87 2 116.3 0.22 5.2 × 10-11 4.9 × 10-14
PYGB 20p11 5.66 3.96 4 55.6 0.67 0.085 0.38
HSD17B12 11p11 5.51 5.49 11 50.6 0.55 1.1 × 10-10 6.7 × 10-16
GSTM1 1p13 5.49 5.14 1 118.3 0.68 7.8 × 10-7 5.0 × 10-5
GSTM2 1p13 5.31 5.15 1 119.16 0.42 3.7 × 10-6 1.5 × 10-5
TMED10 14q24 5.31 5.27 4 56.3 0.58 0.12 0.08
  1. a Genes in bold were also reported by Morley et al. [2].