Towards a semi-automatic functional annotation tool based on decision-tree techniques

BMC Proceedings

Table 1 Number of proteins that have at least one descriptor of each type: blastmatchGo, blastmatchSw, interpro.

L. sakei andL. bulgaricus protein distribution at the first level of the functional hierarchy. a/b: a is the number of proteins with at least one highly similar (percentage of identical residues greater than 50% on a consistent length) protein with a GO-term descriptor, a Swiss-Prot keyword and an INTERPRO domain, b is the number of proteins belonging to this class for the considered genome.

ISSN: 1753-6561