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Table 1 Abbreviations and short descriptions of variables.

From: Machine learning techniques to identify putative genes involved in nitrogen catabolite repression in the yeast Saccharomyces cerevisiae

Abbreviation Description
NUM Number of GATA boxes
1-GAP, 2-GAP, 3-GAP, B-GAP First, second and third smallest, and biggest GATA gaps
M-GAP, MI-GAP, SD-GAP Mean, median and standard deviation (sd) of all GATA gaps
i-MINDIST (i = 2,..., 5) Minimum number of bp spanning over i GATA boxes
UP-i-MER (i = 1, 2, 3) N{1, i}GATA
DOWN-i-MER (i = 1, 2, 3) GATAN{1, i}
GAP-i-MER (i = 1, 2) N{1, i}GATAN{1, i}
F-POS, L-POS Positions of the first and of the last GATA boxes, resp.
M-POS, MI-POS, SD-POS Mean, median and sd of the positions of all GATA boxes