From: Comparison of analyses of the QTLMAS XII common dataset. I: Genomic selection
Model | Model [reference] | Number of markers | SNP variance | Respons variable |
---|---|---|---|---|
GPBLUP1 | GBV(3)3328 [11] | 3328 | σ2G | Phenotype |
GPBLUP2 | GBV(3)1200 [11] | 1200 | σ2G | Phenotype |
GPBLUP3 | GBV(3)600 [11] | 600 | σ2G | Phenotype |
GPBLUP4 | GBV(3)300 [11] | 300 | σ2G | Phenotype |
GPBLUP5 | GBV(4)3328 [11] | 3328 | σ2G/3328 | Phenotype |
GPBLUP6 | GBV(4)1200 [11] | 1200 | σ2G/1200 | Phenotype |
GPBLUP7 | GBV(4)600 [11] | 600 | σ2G/600 | Phenotype |
GPBLUP8 | GBV(4)300 [11] | 300 | σ2G/300 | Phenotype |
GPBLUP9 | GEBV1 [14] | 595 | σ2G | Phenotype |
GPBLUP10 | GEBV2 [14] | 595 | σ2G/595 | Phenotype |
GPBLUP11 | GEBV3 [14] | 618 | σ2G | EBV |
GPBLUP12 | GEBV4 [14] | 618 | σ2G/618 | EBV |
GPBLUP13 | BLUP1 [15] | 6000 | σ2E | Phenotype |
GPBLUP14 | BLUP2 [15] | 6000 | σ2G/6000 | Phenotype |
GPBLUP15 | RR2* [15] | 6000 | Ridge coefficient | Phenotype |
GPBLUP16 | RR2* [15] | 6000 | Ridge coefficient | EBV |