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Table 3 Bayesian models, their name in the contributed paper, assumptions on SNP effects and polygenic effects.

From: Comparison of analyses of the QTLMAS XII common dataset. I: Genomic selection

Model Model [reference] SNP effect Polygenic effect Number of QTL assumed apriori
GPBayes1 HAP_POL [16] IBD + 30
GPBayes2 HAP_NOPOL [16] IBD - 30
GPBayes3 SNP_POL [16] Single SNP + 30
GPBayes4 SNP_NOPOL [16] Single SNP - 30
GPBayes5 Scenario11 [17] 5 SNP haplotype - 12