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Table 3 Bayesian models, their name in the contributed paper, assumptions on SNP effects and polygenic effects.

From: Comparison of analyses of the QTLMAS XII common dataset. I: Genomic selection

Model

Model [reference]

SNP effect

Polygenic effect

Number of QTL assumed apriori

GPBayes1

HAP_POL [16]

IBD

+

30

GPBayes2

HAP_NOPOL [16]

IBD

-

30

GPBayes3

SNP_POL [16]

Single SNP

+

30

GPBayes4

SNP_NOPOL [16]

Single SNP

-

30

GPBayes5

Scenario11 [17]

5 SNP haplotype

-

12