Table 2 Summary of studies.
Study | Type | Loci | Type of locia | Loci effects | Additional effects | Model | Comments |
|---|---|---|---|---|---|---|---|
LABayes [7] | LA | multiple | multi-markerb | fixed, additive | sex + generation | Bayesian | only every tenth marker used |
LDBayes [8] | LD | multiple | single marker | random, additive | - | Bayesian | |
LDLA1 [9] | LD | multiple | single marker | fixed, additive +dominance | polygenic | mixed model, REMLc and FSd | markers selected by allele frequency difference in high/low offspring per sire |
LDLA | single | haplotype (2) | random, additive | polygenic | variance component, REML | markers selected by allele frequency difference in high/low offspring per sire | |
LDmulti [10] | LD | multiple | single marker | fixed, additive +dominance +epistasis | pre-correction for polygenic + sex + generation | linear regression, least squares and FS | mixed model, REML used for pre-correction |
LDHap [11] | LD | single | haplotype (10e) | fixed, additive | pre-correction for polygenic + sex + generation | phylogeny building, cluster analysisf | mixed model, MLg for pre-correction, maximum in 10 cM interval |
LD | single | single marker | fixed, additive | polygenic + sex + generation | mixed model, ML | maximum in 5 cM interval, explored epistasis | |
LDLA2 [12] | LA | two | single marker | random, additive | polygenic | variance component, REML | only marker data from last two generations used |
LDLA | single | haplotype (10) | random, additive | polygenic | variance component, REML | only marker data from last two generations used, only on most significant region per chromosome from LA | |
LD | single | haplotype (3) | random, additive | polygenic | variance component, REML | only marker data from last two generations used, only on most significant region per chromosome from LA |