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Table 1 Putative markers identified using Chi-square tests on high and low tails for each sire.

From: Efficient detection of QTL with large effects in a simulated pig-type pedigree using selective genotyping

Marker

Sire ID

# 2's low-pool

# 2's high-pool

Chi-square

Marker

Sire ID

# 2's low-pool

# 2's high-pool

Chi-square

232

8

17

7

10.4

2277

1034

16

6

10.1

274

9

4

14

10.1

2692

2627

0

9

11.6

285

9

16

6

10.1

2733

12

7

17

10.4

289

9

4

14

10.1

3007

389

3

14

12.4

290

1117

17

7

10.4

3008

389

3

13

10.4

296

1117

7

17

10.4

3011

389

17

6

12.4

302

1117

3

13

10.4

3014

2483

3

13

10.4

361

15

14

4

10.1

3024

1493

17

7

10.4

386

1117

14

4

10.1

3029*

1493

13

3

10.4

396

15

16

5

12.1

3030

15

18

8

11.0

397

8

5

16

12.1

3031

2483

1

10

10.2

399

15

16

5

12.1

3032

2483

1

12

13.8

403

15

4

16

14.4

3033*

15

6

16

10.1

404

8

16

6

10.1

3034

2483

19

10

10.2

411

1117

16

6

10.1

3039

9

18

8

11.0

415

1117

16

6

10.1

3040

1493

6

16

10.1

416

1117

16

6

10.1

3043

1493

14

4

10.1

426

1662

10

19

10.2

3045

9

16

6

10.1

428

1662

10

1

10.2

3046

1493

6

16

10.1

437

1117

16

6

10.1

3047

2483

4

14

10.1

439

1117

16

6

10.1

3048

1493

6

16

10.1

442

1117

17

6

12.4

3049

2483

2

12

11.0

444

1117

16

6

10.1

3051

2483

1

10

10.2

450

1117

3

14

12.4

3056

9

16

6

10.1

452

1117

3

14

12.4

3058

9

16

6

10.1

455

1117

19

8

13.8

3061

389

4

14

10.1

457

1117

14

4

10.1

3062*

389

16

6

10.1

464

1117

19

10

10.2

3068*

389

4

14

10.1

466

1117

2

12

11.0

3079

2483

4

14

10.1

513

1117

0

9

11.6

3080

2483

2

12

11.0

534

1117

16

6

10.1

3082

9

16

6

10.1

726

222

10

19

10.2

3091

389

4

14

10.1

1125

1475

17

7

10.4

3151

222

18

7

12.9

1212

8

14

4

10.1

3159

222

16

6

10.1

1326

8

4

14

10.1

3177

389

14

3

12.4

1483

2008

14

4

10.1

3180

389

6

16

10.1

1498

2008

7

17

10.4

3182

1149

18

8

11.0

2160

1034

14

4

10.1

3192

389

6

17

12.4

2162

1034

6

17

12.4

3229

2

4

14

10.1

2166

1034

6

17

12.4

3479

2483

14

4

10.1

2173*

1

4

14

10.1

3487

2483

16

6

10.1

2176

1034

18

7

12.9

3506

529

17

7

10.4

2178

1

17

7

10.4

3514

389

18

7

12.9

2180

1034

1

11

11.9

3546

529

4

14

10.1

2182

1

3

13

10.4

3550

529

4

14

10.1

2183

1

2

13

12.9

3558

529

19

10

10.2

2185

1

14

4

10.1

3646

389

14

4

10.1

2187

1

4

14

10.1

3701

529

5

16

12.1

2189

1

2

13

12.9

3710

529

8

18

11.0

2190

1034

17

7

10.4

3714

529

7

18

12.9

2192

1

18

7

12.9

3716

529

12

2

11.0

2193

1034

18

6

15.0

3765

529

5

16

12.1

2196

1

14

4

10.1

3766

529

5

16

12.1

2219

1

2

13

12.9

3965

389

13

3

10.4

2220

1

18

8

11.0

4891

7

19

10

10.2

2221

1

18

8

11.0

5156

3127

14

4

10.1

2225

1

16

6

10.1

5330

2528

3

13

10.4

  1. * Markers significantly segregating for 2 sires