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Table 1 Putative markers identified using Chi-square tests on high and low tails for each sire.

From: Efficient detection of QTL with large effects in a simulated pig-type pedigree using selective genotyping

Marker Sire ID # 2's low-pool # 2's high-pool Chi-square Marker Sire ID # 2's low-pool # 2's high-pool Chi-square
232 8 17 7 10.4 2277 1034 16 6 10.1
274 9 4 14 10.1 2692 2627 0 9 11.6
285 9 16 6 10.1 2733 12 7 17 10.4
289 9 4 14 10.1 3007 389 3 14 12.4
290 1117 17 7 10.4 3008 389 3 13 10.4
296 1117 7 17 10.4 3011 389 17 6 12.4
302 1117 3 13 10.4 3014 2483 3 13 10.4
361 15 14 4 10.1 3024 1493 17 7 10.4
386 1117 14 4 10.1 3029* 1493 13 3 10.4
396 15 16 5 12.1 3030 15 18 8 11.0
397 8 5 16 12.1 3031 2483 1 10 10.2
399 15 16 5 12.1 3032 2483 1 12 13.8
403 15 4 16 14.4 3033* 15 6 16 10.1
404 8 16 6 10.1 3034 2483 19 10 10.2
411 1117 16 6 10.1 3039 9 18 8 11.0
415 1117 16 6 10.1 3040 1493 6 16 10.1
416 1117 16 6 10.1 3043 1493 14 4 10.1
426 1662 10 19 10.2 3045 9 16 6 10.1
428 1662 10 1 10.2 3046 1493 6 16 10.1
437 1117 16 6 10.1 3047 2483 4 14 10.1
439 1117 16 6 10.1 3048 1493 6 16 10.1
442 1117 17 6 12.4 3049 2483 2 12 11.0
444 1117 16 6 10.1 3051 2483 1 10 10.2
450 1117 3 14 12.4 3056 9 16 6 10.1
452 1117 3 14 12.4 3058 9 16 6 10.1
455 1117 19 8 13.8 3061 389 4 14 10.1
457 1117 14 4 10.1 3062* 389 16 6 10.1
464 1117 19 10 10.2 3068* 389 4 14 10.1
466 1117 2 12 11.0 3079 2483 4 14 10.1
513 1117 0 9 11.6 3080 2483 2 12 11.0
534 1117 16 6 10.1 3082 9 16 6 10.1
726 222 10 19 10.2 3091 389 4 14 10.1
1125 1475 17 7 10.4 3151 222 18 7 12.9
1212 8 14 4 10.1 3159 222 16 6 10.1
1326 8 4 14 10.1 3177 389 14 3 12.4
1483 2008 14 4 10.1 3180 389 6 16 10.1
1498 2008 7 17 10.4 3182 1149 18 8 11.0
2160 1034 14 4 10.1 3192 389 6 17 12.4
2162 1034 6 17 12.4 3229 2 4 14 10.1
2166 1034 6 17 12.4 3479 2483 14 4 10.1
2173* 1 4 14 10.1 3487 2483 16 6 10.1
2176 1034 18 7 12.9 3506 529 17 7 10.4
2178 1 17 7 10.4 3514 389 18 7 12.9
2180 1034 1 11 11.9 3546 529 4 14 10.1
2182 1 3 13 10.4 3550 529 4 14 10.1
2183 1 2 13 12.9 3558 529 19 10 10.2
2185 1 14 4 10.1 3646 389 14 4 10.1
2187 1 4 14 10.1 3701 529 5 16 12.1
2189 1 2 13 12.9 3710 529 8 18 11.0
2190 1034 17 7 10.4 3714 529 7 18 12.9
2192 1 18 7 12.9 3716 529 12 2 11.0
2193 1034 18 6 15.0 3765 529 5 16 12.1
2196 1 14 4 10.1 3766 529 5 16 12.1
2219 1 2 13 12.9 3965 389 13 3 10.4
2220 1 18 8 11.0 4891 7 19 10 10.2
2221 1 18 8 11.0 5156 3127 14 4 10.1
2225 1 16 6 10.1 5330 2528 3 13 10.4
  1. * Markers significantly segregating for 2 sires