Skip to main content

Table 5 Simulated QTLs explaining more than 1% of the genetic variance and their true and estimated position and percentage of genetic (Va) and phenotypic (Vp) variance explained.

From: Efficient detection of QTL with large effects in a simulated pig-type pedigree using selective genotyping

rank QTL location estimated %Va %Vp
4 M1 200 296 0.12 0.03
12 M2 400 399 0.03 0.01
8 M3 772   0.04 0.01
7 M4 1274   0.05 0.01
13 M5 1300 1326 0.03 0.01
5 M6 1486 1483 0.05 0.02
6 M7 1749   0.05 0.02
15 S14 1935   0.02 0.01
17 S16 1978   0.01 0.00
11 M8 2149 2185 0.03 0.01
9 M9 2600   0.04 0.01
2 M10 3032 3033 0.13 0.04
10 M11 3369   0.03 0.01
3 M12 3761 3765 0.13 0.04
14 M13 3965 3965 0.02 0.01
16 M14 4052   0.01 0.00
18 S28 4684   0.01 0.00
19 S31 4770   0.01 0.00
1 M15 4935   0.18 0.05
   sum 0.98 0.29