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Table 2 Top significant epistatic interactions with P < 10-6 and distance between SNPs <10 cM.

From: Data modeling as a main source of discrepancies in single and multiple marker association methods

Epistasis SNP_1 SNP_2 -log10 p-value r2 Distance
AxA 3512 3652 6.59 1.6 × 10-2 14 cM
  3083 5023 6.32 5.8 × 10-5 Diff. chr
  1002 5847 6.21 1.6 × 10-4 Diff. chr
AxD 1546 1652 6.58 2 × 10-2 19.1 cM
  1843 3248 6.02 1.3 × 10-3 Diff. chr
DxA 1308 1411 6.12 1.1 × 10-2 10.3 cM
DxD 3939 5524 6.32 7.2 × 10-4 Diff. chr
  1. r2 is the correlation between SNPs