From: Pathway results from the chicken data set using GOTM, Pathway Studio and Ingenuity softwares
Enriched biological process GO terms | P < 0.01 | Time effect | Species effect | Injection effect |
---|---|---|---|---|
organelle organization and biogenesis: | P = 0.005 | |||
ARPC3 KATNB1 DCTN6 KIF3A JMJD2A HDAC4 MTSS1 | ||||
CBX3 ADRB2 TIMM8A GOLGB1 RHOA RHOB NEDD9 SPTBN5 PEX1 H2AFY2 FMN2 RHOJ | MM8-MM24 | MM8-MA8 | ||
EP400 NSD1 SOX2 BRCA2 YWHAH DDX54 NOC4L ATG9A SUV39H2 SMC3 CDC42BPB | ||||
gluconeogenesis: | P = 0.008 | |||
ATF4 ACN9 TPI1 | ||||
glutamine biosynthesis: | P = 0.005 | |||
GLUL CORO2A | ||||
nervous system development: | P = 0.005 | MM8-MM24 | ||
SPON2 NCKAP1 CHRNA4 CNTF DAB1 TIMM8A EFNB1 NEUROG1 PAX5 RPS6KA3 | ||||
YWHAH SEMA6D ST8SIA2 PARD6B LGI1 NOG CD9 ECE2 HDAC4 MTSS1 | ||||
organelle organization and biogenesis: | P = 0.009 | |||
NSD1 L3MBTL DST NEDD9 SPTBN5 PFN2 | MM8-MA8 | |||
pyruvate metabolism: | P = 0.001 | |||
ATF4 TPI1 | ||||
G-protein signaling\, coupled to IP3 second messenger phospholipase C activating: | P = 0.008 | |||
NMUR1 DGKG P2RY4 AVPR1A DGKZ SPHK1 | ||||
UDP-N-acetylglucosamine metabolism: | P = 0.006 | |||
UAP1 GNE | ||||
negative regulation of DNA replication: | P = 0.0009 | MM8-PM8 | ||
ENPP7 S100A11 CDT1 | ||||
endocytosis: | P = 0.0047 | genes down-regulated | ||
ADRB2 AP1B1 DOCK1 PACSIN3 PACSIN1 LRP6 NECAP2 ELMO3 SNX4 | ||||
tissue development: | P = 0.004 | |||
APOA5 EDA ELF3 LAMB3 LAMC2 BMP4 SOX9 TFAP2A TGFB2 TUFT1 | ||||
ectoderm development | P = 0.003 | |||
EDA ELF3 LAMB3 LAMC2 TFAP2A TGFB2 | ||||
immune response-regulating signal transduction: | P = 0.003 | |||
FYN SPG21 PTPRC | ||||
caspase activation: | P = 0.004 | |||
DIABLO STAT1 CASP9 CASP8AP2 | ||||
Golgi vesicle transport: | P = 0.006 | |||
SEC23A EXOC5 TMED2 COPE COPB1 SEC22A SAR1A MCFD2 COPB2 GOSR1 | MM8-PM8 | |||
protein targeting to mitochondrion: | P = 0.008 | genes up-regulated | ||
TIMM44 TOMM34 TSPO GRPEL1 | ||||
chromatin assembly or disassembly: | P = 0.002 | |||
CBX3 HMGB2 HP1BP3 HDAC8 SMARCE1 CHAF1B SMARCA5 TLK1 | ||||
modification-dependent protein catabolism: | P = 0.008 | |||
FBXO21 RNF11 PSMA2 PSMA5 PSMB1 PSMB3 PSMC5 UBE2E1 UBE3A USP7 PSMF1 USP3 | ||||
protein transport: | P = 0.002 | |||
34 genes |