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Figure 1 | BMC Proceedings

Figure 1

From: sigReannot: an oligo-set re-annotation pipeline based on similarities with the Ensembl transcripts and Unigene clusters

Figure 1

SigReannot classes, example on the complete oligo-set. a) Using the longest stretch and the global similarity criteria SigReannot classifies the oligo-nucleotides into seven categories. Oligo-nucleotides from categories 1 to 4 (in green) can be linked to a unique gene. Categories 3 and 4 have been split according to user request between oligo-nucleotides having a longest contiguous stretch larger or smaller than 30 base pairs. b) This figure shows the impact of the Unigene probe gene linking method on the chicken oligo-set. The gene annotation gain is 2.3% using this method.

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