Table 1 RA-related SNPs identified with ten largest main effects via the elastic-net method (M1)
From: Elastic-net regularization approaches for genome-wide association studies of rheumatoid arthritis
SNP | Chromosomea | Coefficientb |
|---|---|---|
Top 1000 | Â | Â |
   rs6903608 | 6 | -0.3413 |
   rs2395185 | 6 | 0.3285 |
   rs11686264 | 2 | -0.3284 |
   rs6981223 | 8 | -0.31 |
   rs10948693 | 6 | -0.2813 |
   rs9727917 | 1 | -0.2806 |
   rs2440468 | 16 | -0.2736 |
   rs4499874 | 5 | 0.2714 |
   rs9275595 | 6 | 0.2641 |
   rs7970893 | 12 | -0.2492 |
Top 2000 | Â | Â |
   rs2395175 | 6 | 0.2522 |
   rs6903608 | 6 | -0.2299 |
   rs10094729 | 8 | -0.166 |
   rs2101613 | 10 | -0.1613 |
   rs6910071 | 6 | 0.1529 |
   rs660895 | 6 | 0.1522 |
   rs9277554 | 6 | -0.1468 |
   rs12203592 | 6 | -0.1401 |
   rs2578240 | 9 | 0.1356 |
   rs9275572 | 6 | -0.1353 |
Top 3000 | Â | Â |
   rs2395175 | 6 | 0.3532 |
   rs660895 | 6 | 0.2302 |
   rs9275572 | 6 | -0.219 |
   rs10094729 | 8 | -0.1972 |
   rs6903608 | 6 | -0.1889 |
   rs3873444 | 6 | -0.1403 |
   rs7970893 | 12 | -0.1321 |
   rs234592 | 14 | -0.1316 |
   rs10789176 | 1 | -0.125 |
   rs9275601 | 6 | -0.1221 |