Table 1 SNP Selection
From: The effect of minor allele frequency on the likelihood of obtaining false positives
MAF 1% | MAF 5% | MAF 10% | MAF 25% | MAF 50% | |||||
|---|---|---|---|---|---|---|---|---|---|
SNP | % Missing | SNP | % Missing | SNP | % Missing | SNP | % Missing | SNP | % Missing |
rs1722601 | 0 | rs6000509 | 0.06 | rs7291198 | 0.04 | rs2413030 | 0.01 | rs165862 | 0 |
rs16991890 | 0.10 | rs7289964 | 0.45 | rs2227235 | 0.10 | rs1139793 | 0.16 | rs695670 | 0.01 |
rs6001118 | 0.28 | rs9622750 | 0.16 | rs17299838 | 0.28 | rs2071436 | 0.12 | rs5998941 | 0 |
rs12157495 | 0.09 | rs6518774 | 0.12 | rs730483 | 0.04 | rs5752905 | 0.06 | rs5758972 | 0.01 |
rs16994023 | 0 | rs8139704 | 0.18 | rs9615812 | 0.03 | rs5753917 | 0.07 | rs738536 | 0 |
rs5993835 | 0 | rs134049 | 0 | rs2267296 | 5.67 | ||||
rs16997431 | 0.01 | rs13058493 | 0 | rs136575 | 5.29 | ||||
rs17004911 | 0 | rs16989600 | 0 | rs2254907 | 4.73 | ||||
rs7289701 | 0 | rs5998473 | 0 | rs2179321 | 5.45 | ||||
rs11912108 | 0 | rs2267613 | 0 | rs6120328 | 5.65 | ||||
rs1110477 | 4.50 | ||||||||
rs1476053 | 4.60 | ||||||||
rs16998312 | 4.75 | ||||||||
rs17808497 | 4.76 | ||||||||
rs17762006 | 5.29 | ||||||||
rs6082126 | 5.27 | ||||||||
rs11698699 | 5.33 | ||||||||
rs8120594 | 4.98 | ||||||||
rs16989639 | 5.33 | ||||||||
rs6123569 | 5.30 | ||||||||