From: Assessment of genotype imputation methods
Scenario 1
Scenario 2
IMPUTE
0.352 (1.26)
0.078 (0.493)
MACH
0.363 (1.27)
0.093 (0.543)
PLINK
0.509 (1.55)
0.054 (0.617)
fastPHASE
0.483 (1.70)
0.046 (0.633)