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Table 2 Comparsion with true breeding values

From: Genomic selection for QTL-MAS data using a trait-specific relationship matrix

Method

No. marker

r

b

MSD

BayesB

10031

0.676

0.957

41.9

RRBLUP

10031

0.608

0.943

48.7

TAB

10031

0.675

0.971

42.1

 

5000

0.675

0.964

42.1

 

2000

0.675

0.950

42.0

 

1000

0.677

0.945

41.9

 

500

0.678

0.945

41.8

 

200

0.675

0.938

42.1

 

100

0.672

0.927

43.5

TAP

10031

0.626

1.074

46.9

 

5000

0.632

1.045

46.4

 

2000

0.640

0.990

45.5

 

1000

0.643

0.951

45.3

 

500

0.647

0.952

44.9

 

200

0.647

0.930

45.0

 

100

0.626

0.951

46.9

  1. r: correlation coefficient between GEBV and TBV; b: regression coefficient of TBV on GEBV; MSD: mean square deviation of (TBV - GEBV) after correcting for mean.