Variant selection p-value threshold | Common variants only | Common and rare variants | AUC value difference with 95% confidence interval |
---|---|---|---|
0.01 | 0.8057 | 0.8088 | 0.0031 (0.0028, 0.0034) |
0.005 | 0.8063 | 0.8088 | 0.0025 (0.0023, 0.0027) |
0.001 | 0.8056 | 0.8076 | 0.0020 (0.0019, 0.0021) |
5.0 × 10−4 | 0.8062 | 0.8080 | 0.0018 (0.0017, 0.0019) |
1.0 × 10−4 | 0.8075 | 0.8093 | 0.0017 (0.0017, 0.0018) |
5.0 × 10−5 | 0.8075 | 0.8092 | 0.0017 (0.0017, 0.0018) |
1.0 × 10−5 | 0.8079 | 0.8096 | 0.0017 (0.0016, 0.0017) |