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Table 3 Summary of test set composition for different evaluation scenarios

From: A ν-support vector regression based approach for predicting imputation quality

Scenarios

Ethnic population

Samples

from Platform

to Platform

Scenario 1

Western European

Lung cancer

from Affymetrix 500k

to Affymetrix SNP 6.0

Scenario 2

Western European

Lung cancer

from Affymetrix 500k

to Affymetrix SNP 6.0

Scenario 3

Western European

Lung cancer

from Affymetrix 500k

to Affymetrix SNP 6.0

Scenario 4

East Asian

Oral cancer

from Affymetrix 500k

to Affymetrix SNP 6.0

  1. High-lighted fields are the settings that are different from the training set used in the corresponding scenarios.