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Table 2 Number of variants categorized by MAF and functionality

From: Estimating proportions of explained variance: a comparison of whole genome subsets

Functionality region

All frequencies

Allele frequency

  

Common

Rare

Very rare

All regions

49,839 (100%)

11,414

(23%)

6611

(13%)

31,814

(64%)

Genic

16,790

(34%)

2949

(6%)

4763

(10%)

9078

(18%)

Flanking

33,049

(66%)

8465

(17%)

1848

(4%)

22,736

(46%)