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Table 1 Cross-classification of results summed over all SNPs and individuals

From: Evaluating the concordance between sequencing, imputation and microarray genotype calls in the GAW18 data

Sequence genotype1

Microarray genotype

Total

 

AA

AB

BB

Missing (XX)

 

AA

117,284,236

58,271

1,309

2,554

117,346,370

AB

101,015

65,584,521

29,302

8,970

65,723,808

BB

6,844

339,856

41,656,995

24,361

42,028,056

Missing (XX)

3,009,304

1,506,621

977,234

5,911

5,499,070

Total

120,401,399

67,489,269

42,664,840

41,796

230,597,304