Table 2 Comparisons of local estimates from LAMP-LD and MULTIMIX.
From: Admixture mapping analysis in the context of GWAS with GAW18 data
Method | Window size (SNPs) | Mean correlation1 | SD of correlation1 | Mean deviation (%)1 | SD of deviation (%)1 | Diploid inconsistency (%) |
|---|---|---|---|---|---|---|
LAMP-LD | 150 | 0.988 | 0.043 | 4.0 | 3.6 | 19.8 |
MULTIMIX | 150 | 0.959 | 0.105 | 8.0 | 5.8 | Â |
LAMP-LD | 100 | 0.989 | 0.041 | 3.9 | 3.4 | 18 |
MULTIMIX | 100 | 0.975 | 0.100 | 6.0 | 5.2 | Â |
LAMP-LD | 75 | 0.989 | 0.041 | 3.9 | 4.1 | 16.6 |
MULTIMIX | 75 | 0.974 | 0.108 | 6.0 | 4.5 | Â |
LAMP-LD | 50 | 0.989 | 0.043 | 3.7 | 3.2 | 14.2 |
MULTIMIX | 50 | 0.985 | 0.072 | 4.5 | 3.5 | Â |