Table 2 Most significant variants in whole genome sequencing
From: A comparison of whole genome sequencing with exome sequencing for family-based association studies
Rank | SNP | p Value | Function | Rank | SNP | p Value | Function | Rank | SNP | p Value | Function |
|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 3:106206487 | 1 | Intergenic | 11 | 5:144654771 | 5.3E-07 | Intergenic | 21 | 7:11022564 | 8.8E-07 | Exonic |
2 | 9:15503905 | 1.3E-07 | Intronic | 12 | 17:63733954 | 5.3E-07 | Intronic | 22 | 7:11025635 | 8.8E-07 | Intronic |
3 | 9:15500315 | 1.9E-07 | Intronic | 13 | 9:15396745 | 5.5E-07 | Intergenic | 23 | 7:11027754 | 8.8E-07 | Intronic |
4 | 9:15501713 | 1.9E-07 | Intronic | 14 | 9:15527348 | 6.7E-07 | Intergenic | 24 | 7:11016614 | 9.4E-07 | Intronic |
5 | 9:15501753 | 1.9E-07 | Intronic | 15 | 9:15501422 | 7.1E-07 | Intronic | 25 | 7:11008221 | 1.0E-06 | Intergenic |
6 | 9:15500150 | 2.8E-07 | Intronic | 16 | 9:15472139 | 7.5E-07 | Intronic | 26 | 9:15459251 | 1.0E-06 | Intronic |
7 | 9:15528010 | 3.1E-07 | Intergenic | 17 | 15:92024157 | 7.5E-07 | Intergenic | 27 | 7:11022230 | 1.0E-06 | Exonic |
8 | 9:15482976 | 3.3E-07 | Intronic | 18 | 9:15396695 | 8.4E-07 | Intergenic | 28 | 7:11025638 | 1.1E-06 | Intronic |
9 | 9:15498495 | 3.7E-07 | Intronic | 19 | 7:11016690 | 8.8E-07 | Intronic | 29 | 7:11015444 | 1.1E-06 | Intronic |
10 | 9:15466033 | 4.0E-07 | Intronic | 20 | 7:11018224 | 8.8E-07 | Intronic | 30 | 9:15397233 | 1.1E-06 | Intergenic |