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Table 1 P values of the top 20 genes based on 15 nuclear families

From: Whole genome sequencing data from pedigrees suggests linkage disequilibrium among rare variants created by population admixture

Chr

Gene

# of rare variants transmitted

# of rare variants non transmitted

pValue

# of trios contributing most statistical evidence

# rare variants transmitted in the most contributing trios

# of rare variants nontransmitted in the most contributing trios

11

DLG2

279

876

4.45 × 10−69

4

44

578

5

CDH18

117

473

1.23 × 10−48

2

12

272

11

RP11-179A16.1.1

122

466

1.11 × 10−45

4

30

376

11

ODZ4

73

372

1.33 × 10−45

4

16

290

7

CNTNAP2

200

570

1.47 × 10−40

2

21

309

13

PCDH9

73

329

2.47 × 10−37

1

13

217

3

STAG1

31

233

1.75 × 10−35

3

3

207

11

NELL1

114

393

2.93 × 10−35

3

26

232

1

CD247

185

12

6.58 × 10−35

1

175

2

1

OSBPL9

19

197

9.20 × 10−34

1

0

166

11

GRIA4

28

212

1.56 × 10−32

3

6

156

3

EPHA6

151

430

5.53 × 10−31

6

95

366

5

CDH12

95

332

1.88 × 10−30

2

15

190

1

KIF1B

199

28

7.44 × 10−30

1

180

1

11

RP11-124G5.3.1

16

168

3.83 × 10−29

1

1

146

11

UVRAG

35

210

5.09 × 10−29

4

5

182

1

DISC1

60

253

1.04 × 10−27

3

27

217

11

TEAD1

40

213

1.49 × 10−27

2

10

161

5

RP11-454P21.1.1

24

174

1.57 × 10−26

3

4

158

15

RP11-387D10.2.1

12

145

2.55 × 10−26

1

0

132