Figure 1
From: Population structure at different minor allele frequency levels
Eigenvalues for different values of the MAF. Each curve shows the evolution of an eigenvalue as we slide the window of SNVs used in PCA. The colors were selected manually to show likely continuation whenever there is a crossing of eigenvalues. For clarity, the plot shows only 10 eigenvalues. The vertical dotted lines correspond to the locations that were selected for the scatterplot panels in Figure 2.