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Table 1 The accuracies of genomic prediction for additive genetic contribution to SBP.

From: Prediction of genetic contributions to complex traits using whole genome sequencing data

SNPset

Model

TRN

 

TST

  

Within-family

Across-family

 

Within-family

Across-family

Set 1

GBLUP

0.844 (9.80)

0.823 (6.93)

 

0.348 (3.35)

0.062 (12.09)

Set 2

GBLUP

0.850 (9.70)

0.828 (6.85)

 

0.336 (3.39)

0.013 (12.16)

Set 1

BayesCπ

0.883 (8.84)

0.854 (6.31)

 

0.351 (3.38)

0.054 (12.31)

Set 2

BayesCπ

0.866 (9.45)

0.850 (6.50)

 

0.347 (3.36)

0.035 (12.11)

  1. The accuracy is measured by correlation (MSE) between true and fitted additive genetic contributions from genomic predictions in the TRN and TST using SNP set 1 (common SNPs) and set 2 (common and collapsed SNPs).