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Table 1 Methods used to estimate Direct Genomic Values (DGV) from genotypic and phenotypic data of the XVI QTL-MAS Workshop

From: XVIth QTLMAS: simulated dataset and comparative analysis of submitted results for QTL mapping and genomic evaluation

First Author

Methods1

Label

Pong Wong

Bayesian Horseshoe

Horseshoe

 

Bayes A

BayesA

 

Bayes B

BayesB

 

Bayes C

BayesC

 

Bayesian Lasso

BayesLasso

 

GBLUP

GBLUP

Ogutu*

Group Bridge Regression

GBRIDGE

 

Group Min Max Concavity Penalty

GMCP

 

Group Least Angle Shrinkage & selection operator

GLASSO

 

Group smoothly clipped absolute deviation

GSCAD

 

sparse group LASSO

sgLASSO

  1. * Ogutu evaluated 5 methods with 10 different group size of predictor each