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Table 1 Results of causal analysis using gene expression probes

From: Using gene expression data to identify causal pathways between genotype and phenotype in a complex disease: application to Genetic Analysis Workshop 19

SNP

  

Preferred model

SNP name

Chromosome (bp position)

Gene expression probe

Phenotype

SEM

BUF

rs9869956

3 (155164342)

GI42661149

SBP

(b)

(b)

rs11709568

3 (155177333)

GI42661149

SBP

(b)

(b)

rs6440993

3 (155180174)

GI42661149

SBP

(b)

(b)

rs9829532

3 (155181831)

GI42661149

SBP

(b)

(b)

rs7618495

3 (155184048)

GI42661149

SBP

(b)

(a)

rs4680185

3 (155213002)

GI42661149

SBP

(b)

(b)

rs822711

3 (165003805)

GI42661149

SBP

(b)

(b)

rs4921240

5 (159327355)

GI42661149

SBP

(b)

(b)

rs9640732

7 (78320848)

GI42661149

SBP

(b)

(b)

rs13246026

7 (78331066)

GI42661149

SBP

(b)

(b)

rs7793494

7 (78344389)

GI42661149

SBP

(b)

(b)

rs11768116

7 (78345207)

GI42661149

SBP

(b)

(b)

rs13242288

7 (78345298)

GI42661149

SBP

(b)

(b)

rs7779874

7 (78346879)

GI42661149

SBP

(d)

(b)

rs757395

7 (78356891)

GI42661149

SBP

(b)

(f)

rs1888238

7 (78390300)

GI42661149

SBP

(b)

(b)

rs13308578

7 (78408559)

GI42661149

SBP

(b)

(b)

rs7038267

9 (4821348)

GI42661149

SBP

(d)

(f)

rs34868670

5 (40237843)

GI7706275

SBP

(d)

(a)

rs10246727

7 (152876977)

GI7706275

SBP

(b)

(b)

rs2451078

13 (20098289)

GI7706275

SBP

(d)

(a)

rs1570621

13 (47170118)

GI7706275

SBP

(d)

(f)

rs4942556

13 (47174585)

GI7706275

SBP

(b)

(b)

rs1105813

17 (7721542)

GI7706275

SBP

(d)

(f)