From: Comparing family-based rare variant association tests for dichotomous phenotypes
α | RV-TDT | GEE-KM | PedCMC | PedGene | FARVAT |
---|---|---|---|---|---|
CMC/BRVVT-BRV/VT-CMC/WSS | Kernel/burden | C-alpha/burden/SKAT-O | |||
0.1 | 0.0108/0.0130/0/0/0 | 0.2137 | 0.0714 | 0.0895/0.0879 | 0.0865/0.0888/0.0864 |
0.05 | 0.0040/0.0040/0/0/0 | 0.1050 | 0.0357 | 0.0490/0.0433 | 0.0445/0.0434/0.0450 |
0.01 | 0.0009/0.0009/0/0/0 | 0.0163 | 0.0079 | 0.0141/0.0098 | 0.0112/0.0092/0.0115 |
0.005 | 0.0004/0.0004/0/0/0 | 0.0066 | 0.0043 | 0.0086/0.0056 | 0.0065/0.0050/0.0068 |
0.001 | 0/0/0/0/0 | 0.0006 | 0.0011 | 0.0029/0.0017 | 0.0020/0.0013/0.0021 |