Table 3 Top 10 genes associated with natural logarithm change in HDL-C
MMLT | SKATa | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
Genes | N | Effect size | SE | p Value | FDR q value | Genes | N | Q-statistic | p Value | FDR q value |
ZKSCAN8 | 4 | 0.62 | 0.16 | 7.42E-05 | 0.584 | KRT222 | 6 | 1271.43 | 5.97E-03 | 0.915 |
ZSCAN16 | 4 | 0.62 | 0.16 | 7.42E-05 | 0.584 | FAM211A | 5 | 840.88 | 1.00E-02 | 0.915 |
MAGI2 | 67 | 0.27 | 0.08 | 8.12E-04 | 0.999 | ZKSCAN8 | 4 | 1095.82 | 1.13E-02 | 0.915 |
CAPN3 | 30 | 0.29 | 0.09 | 8.72E-04 | 0.999 | ZSCAN16 | 4 | 1095.82 | 1.13E-02 | 0.915 |
AK5 | 37 | 0.27 | 0.08 | 8.78E-04 | 0.999 | HEATR5B | 1 | 552.38 | 1.28E-02 | 0.915 |
KCTD14 | 37 | 0.27 | 0.08 | 8.78E-04 | 0.999 | IFT27 | 1 | 552.38 | 1.28E-02 | 0.915 |
PTP4A2 | 91 | 0.29 | 0.09 | 1.44E-03 | 0.999 | ZNF567 | 1 | 552.38 | 1.28E-02 | 0.915 |
GSTTP1 | 28 | −0.45 | 0.14 | 1.45E-03 | 0.999 | ZNF337 | 4 | 983.95 | 1.28E-02 | 0.915 |
FOXI1 | 27 | 0.31 | 0.10 | 1.64E-03 | 0.999 | CD300E | 3 | 1014.54 | 1.40E-02 | 0.915 |
VPS37A | 4 | 0.88 | 0.28 | 1.76E-03 | 0.999 | SORCS1 | 9 | 1010.61 | 1.60E-02 | 0.915 |