From: CpG-set association assessment of lipid concentration changes and DNA methylation
Unrelated individuals (sample size = 242) | Families (sample size = 714) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Univariate | VC-score | PCEV | Univariate | VC-score | ||||||||||||
CpG | Genes | Chr | p Value | Genes | Chr | p Value | Genes | Chr | p Value | CpG | Genes | Chr | p Value | Genes | Chr | p Value |
HDL | ||||||||||||||||
cg14258154 | ZFYVE9 | 1 | 1.56E-06 | ALDH1A2 | 15 | 2.85E-05 | NUDCD3 | 7 | 1.87E-04 | cg02273903 | KIAA1199 | 15 | 3.30E-08* | RNMT † | 18 | 2.55E-06* |
cg26385523 | CTU1 | 19 | 3.32E-06 | CSF1R | 5 | 5.18E-05 | LIN28B | 6 | 2.01E-04 | cg21250577 | ETFA | 15 | 5.24E-08* | MIR130B | 22 | 3.09E-06* |
cg00638075 | RNF40† | 16 | 4.04E-06 | NUDCD3 | 7 | 5.57E-05 | NID1 | 1 | 7.68E-04 | cg00979026 | LAMP1 | 13 | 8.52E-08* | C6orf141 | 6 | 5.38E-06 |
cg27639620 | TSPAN4 | 11 | 6.36E-06 | ACD | 16 | 1.17E-04 | CSMD1 | 8 | 1.10E-03 | cg21654314 | CHMP6 | 17 | 1.40E-07* | TUBB3 | 16 | 7.03E-06 |
cg26671183 | PFKFB2 | 1 | 6.48E-06 | C17orf57 | 17 | 1.51E-04 | ECEL1P2 | 2 | 1.24E-03 | cg17990398 | JAKMIP3 | 10 | 1.60E-07* | TBX15 | 1 | 9.01E-06 |
TG | ||||||||||||||||
cg18522239 | LGALS9C | 17 | 2.04E-06 | LGALS9C | 17 | 3.12E-06 * | PTPRN | 7 | 1.58E-04 | cg12110750 | TSHZ3 | 19 | 3.09E-06 | MIR941–1 † | 20 | 3.07E-05 |
cg05984096 | CSK | 15 | 7.63E-06 | ZNF592 | 15 | 1.20E-05 | RSPO2 | 8 | 3.73E-04 | cg02565993 | FIBIN | 11 | 3.50E-06 | TP53I11 | 11 | 4.07E-05 |
cg06043820 | ZNF592 | 15 | 9.86E-06 | HIPK2 | 7 | 1.19E-04 | FAM86A | 16 | 5.66E-04 | cg08552519 | PCBP4 | 3 | 6.02E-06 | GKN1 | 2 | 4.60E-05 |
cg04902851 | NSMAF | 8 | 1.18E-05 | SPAG8 | 9 | 1.83E-04 | HOXD13 | 2 | 8.30E-04 | cg04004830 | SDPR | 2 | 6.15E-06 | PRR4 † | 12 | 5.09E-05 |
cg10243301 | ZNF682 | 19 | 1.43E-05 | CSK | 15 | 3.03E-04 | C14orf28 | 14 | 1.24E-03 | cg09969806 | KIF1A | 2 | 6.43E-06 | LOC100216545 | 7 | 6.61E-05 |